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PBAL39_09116 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09116" - Transcriptional regulator, AraC family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09116Transcriptional regulator, AraC family protein (287 aa)    
Predicted Functional Partners:
PBAL39_24158
Transcriptional regulator (303 aa)
   
          0.635
PBAL39_09106
Putative iron transport/utilisation related protein (242 aa)
              0.630
PBAL39_09111
Uncharacterized protein (36 aa)
              0.627
PBAL39_19534
HI0933-like protein (145 aa)
   
          0.536
PBAL39_24970
Diguanylate cyclase/phosphodiesterase (984 aa)
       
    0.512
PBAL39_19844
Tetratricopeptide TPR_2 (754 aa)
       
    0.512
PBAL39_18759
Periplasmic sensor signal transduction histidine kinase (566 aa)
       
    0.512
PBAL39_13902
Possible sensor protein (663 aa)
       
    0.512
PBAL39_13035
Tetratricopeptide TPR_2 (720 aa)
       
    0.512
PBAL39_03969
Putative transmembrane protein (379 aa)
       
    0.512
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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