STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37406.1Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants. (159 aa)    
Predicted Functional Partners:
EDM37405.1
Hypothetical protein.
 
 
 0.999
EDM37408.1
Probable molybdopterin oxidoreductase; COG5557 Polysulphide reductase.
 
 
 0.999
EDM37409.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
 
 0.999
EDM36790.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
EDM37407.1
Hypothetical protein; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
 
   0.996
EDM37404.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.969
EDM37402.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.930
EDM37410.1
Cytochrome c, mono- and diheme variant.
 
 
  0.921
EDM37399.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.902
EDM37772.1
Probable oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
 0.899
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.