STRINGSTRING
PBAL39_09891 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09891" - PKD in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09891PKD (1990 aa)    
Predicted Functional Partners:
PBAL39_09896
Uncharacterized protein (309 aa)
 
          0.905
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.778
PBAL39_17514
Uncharacterized protein (811 aa)
   
          0.764
PBAL39_02177
Uncharacterized protein (360 aa)
   
          0.760
PBAL39_09871
Uncharacterized protein (387 aa)
 
          0.756
PBAL39_09391
Uncharacterized protein (270 aa)
   
          0.755
PBAL39_18369
Uncharacterized protein (926 aa)
   
          0.750
PBAL39_25045
Uncharacterized protein (226 aa)
   
          0.749
PBAL39_05028
Uncharacterized protein (431 aa)
   
          0.746
PBAL39_09491
Gliding related protein possible gldN and/or gldO (290 aa)
   
          0.736
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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