"PBAL39_09891" - PKD in
Pedobacter sp. BAL39
Summary view: shows current interactions. Nodes can be moved; popups provide information on nodes & edges.
Groups of genes that are frequently observed in each other's genomic neighborhood.
Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Gene families whose occurrence patterns across genomes show similarities.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
query proteins and first shell of interactors
second shell of interactors
proteins of unknown 3D structure
some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
PKD (1990 aa)
Predicted Functional Partners:
Uncharacterized protein (309 aa)
Uncharacterized protein (1168 aa)
Uncharacterized protein (811 aa)
Uncharacterized protein (360 aa)
Uncharacterized protein (387 aa)
Uncharacterized protein (270 aa)
Uncharacterized protein (926 aa)