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PBAL39_10855 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10855" - Cyclic nucleotide binding regulatory protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10855Cyclic nucleotide binding regulatory protein (191 aa)    
Predicted Functional Partners:
PBAL39_12578
Uncharacterized protein (215 aa)
   
          0.778
PBAL39_19694
RNA polymerase sigma-70 factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (286 aa)
       
  0.748
PBAL39_18429
RNA polymerase sigma-70 factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (288 aa)
       
  0.748
PBAL39_06156
RNA polymerase sigma-70 factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (286 aa)
       
  0.748
PBAL39_10850
Gluconokinase (494 aa)
   
        0.664
PBAL39_10860
Alkyl hydroperoxide reductase AhpD ; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (145 aa)
 
     
  0.635
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (330 aa)
     
 
  0.628
PBAL39_20630
Ankyrin (216 aa)
     
  0.594
PBAL39_10291
Ankyrin repeat domain protein (405 aa)
     
  0.594
PBAL39_10286
Ankyrin (450 aa)
     
  0.594
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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