STRINGSTRING
PBAL39_12563 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12563" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12563Uncharacterized protein (153 aa)    
Predicted Functional Partners:
PBAL39_12568
Uncharacterized protein (341 aa)
 
          0.849
PBAL39_06276
DNA-directed RNA polymerase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (108 aa)
   
          0.773
PBAL39_11482
Uncharacterized protein (247 aa)
   
          0.771
PBAL39_13657
Uncharacterized protein (227 aa)
   
          0.746
PBAL39_01022
Uncharacterized protein (893 aa)
   
          0.732
PBAL39_05513
Uncharacterized protein (818 aa)
   
          0.731
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.731
PBAL39_05483
Putative outer membrane protein (431 aa)
   
          0.730
PBAL39_19230
Putative hemin receptor (496 aa)
   
          0.713
PBAL39_06546
Outer membrane protein probable bacterial surface antigen (829 aa)
   
          0.708
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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