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STRINGSTRING
EDM34326.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34326.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34326.1Uncharacterized protein; COG2367 Beta-lactamase class A (293 aa)    
Predicted Functional Partners:
EDM36993.1
annotation not available (1168 aa)
   
          0.630
EDM37171.1
annotation not available (399 aa)
   
          0.595
EDM34328.1
annotation not available (812 aa)
              0.521
EDM34327.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (367 aa)
              0.521
EDM35448.1
annotation not available (953 aa)
   
          0.489
EDM36610.1
Uncharacterized protein; COG1396 Predicted transcriptional regulators (121 aa)
   
          0.464
EDM35953.1
Uncharacterized protein; COG2755 Lysophospholipase L1 and related esterases (239 aa)
   
          0.450
EDM37423.1
Uncharacterized protein; COG0442 Prolyl-tRNA synthetase (317 aa)
   
          0.450
EDM33895.1
CHU large protein glucose/sorbosone dehydrogenase-related; COG1843 Flagellar hook capping protein (1367 aa)
   
          0.449
EDM34433.1
annotation not available (244 aa)
   
 
      0.410
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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