STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34328.1Glutaminase. (812 aa)    
Predicted Functional Partners:
EDM34330.1
Hypothetical protein.
 
     0.841
EDM34331.1
Putative outer membrane protein.
 
     0.834
EDM34332.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.826
EDM34327.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.824
EDM33889.1
Hypothetical protein; COG2942 N-acyl-D-glucosamine 2-epimerase.
 
     0.761
EDM38305.1
COG3533 Uncharacterized protein conserved in bacteria.
 
     0.760
EDM34329.1
COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.687
EDM34120.1
Hypothetical protein.
  
     0.608
EDM37566.1
Hypothetical protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
     0.607
EDM37617.1
Hypothetical protein.
  
     0.582
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.