STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35375.1Thioredoxin family protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (559 aa)    
Predicted Functional Partners:
msrA
Bifunctional methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.942
EDM35029.1
Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.
   
 0.942
EDM36371.1
COG0450 Peroxiredoxin.
   
  0.671
EDM34471.1
COG0450 Peroxiredoxin.
   
  0.671
EDM36079.1
Mercuric reductase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
  
  0.645
EDM34736.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.620
EDM35711.1
Dihydrolipoyl dehydrogenanse; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
   
  0.590
EDM36138.1
Dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase); COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
   
  0.590
EDM36238.1
Thiol:disulfide interchange protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.588
EDM38838.1
Thioredoxin family protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.588
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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