Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM35231.1COG5651 PPE-repeat proteins. (1204 aa)    
Predicted Functional Partners:
EDM35232.1
Hypothetical protein.
      
0.709
EDM35233.1
Hypothetical protein.
       0.709
EDM35234.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
      
0.709
EDM35230.1
Phage related tail fiber protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
      
0.596
EDM35235.1
Putative membrane-anchored cell surface protein; COG5295 Autotransporter adhesin.
      
0.518
EDM35229.1
Hypothetical protein.
       0.439
EDM35228.1
Hypothetical protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
       0.436
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.