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PBAL39_14144 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14144" - RNA polymerase ECF-type sigma factor in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14144RNA polymerase ECF-type sigma factor (208 aa)    
Predicted Functional Partners:
PBAL39_14149
Putative anti-sigma factor (339 aa)
 
          0.687
PBAL39_14159
Uncharacterized protein (511 aa)
 
          0.556
pncB
Nicotinate phosphoribosyltransferase ; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (392 aa)
              0.535
PBAL39_14154
Putative outer membrane protein (1139 aa)
              0.518
PBAL39_07210
RNA polymerase sigma factor (Possible RNA polymerase sigma-24 factor) (194 aa)
   
          0.492
PBAL39_07690
RNA polymerase ECF-type sigma factor (203 aa)
   
          0.491
PBAL39_14164
Probable glycosyl hydrolase (547 aa)
              0.473
PBAL39_14134
Uncharacterized protein (215 aa)
              0.449
PBAL39_03474
RNA polymerase ECF-type sigma factor (200 aa)
   
          0.402
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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