STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37709.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
EDM37710.1
Hypothetical protein.
 
     0.809
EDM37708.1
Cell surface protein; COG3291 FOG: PKD repeat.
 
     0.767
EDM37706.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.707
EDM37711.1
Putative desulfatase.
 
     0.693
EDM37707.1
Hypothetical protein.
 
     0.676
EDM37712.1
Twin-arginine translocation pathway signal; COG0673 Predicted dehydrogenases and related proteins.
 
     0.570
EDM35542.1
Transcriptional regulator, Crp/Fnr family protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.543
EDM37315.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
  
     0.540
EDM35773.1
Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.531
EDM37317.1
Hypothetical protein; COG0371 Glycerol dehydrogenase and related enzymes.
  
     0.528
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.