STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37818.1Glycosyl transferase, group 1; COG0438 Glycosyltransferase. (358 aa)    
Predicted Functional Partners:
EDM37817.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.843
EDM37813.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.838
EDM37814.1
Hypothetical protein.
       0.773
EDM37815.1
Hypothetical protein; COG2233 Xanthine/uracil permeases.
       0.773
EDM37816.1
Hypothetical protein.
       0.773
EDM37810.1
Glf protein; COG0562 UDP-galactopyranose mutase.
  
 
  0.772
EDM37340.1
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; COG0438 Glycosyltransferase.
  
     0.768
EDM37819.1
Hypothetical protein.
       0.701
EDM38439.1
HAD-superfamily hydrolase, subfamily IIB; COG0380 Trehalose-6-phosphate synthase.
  
 0.581
EDM37809.1
Hypothetical protein; COG3774 Mannosyltransferase OCH1 and related enzymes.
  
    0.579
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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