Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM33853.1 | EDM35151.1 | PBAL39_00005 | PBAL39_16756 | Hypothetical protein; COG5478 Predicted small integral membrane protein. | COG3685 Uncharacterized protein conserved in bacteria. | 0.558 |
EDM33853.1 | EDM37781.1 | PBAL39_00005 | PBAL39_15189 | Hypothetical protein; COG5478 Predicted small integral membrane protein. | COG3685 Uncharacterized protein conserved in bacteria. | 0.491 |
EDM35151.1 | EDM33853.1 | PBAL39_16756 | PBAL39_00005 | COG3685 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG5478 Predicted small integral membrane protein. | 0.558 |
EDM35151.1 | EDM35152.1 | PBAL39_16756 | PBAL39_16761 | COG3685 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.503 |
EDM35151.1 | EDM35179.1 | PBAL39_16756 | PBAL39_16896 | COG3685 Uncharacterized protein conserved in bacteria. | COG1793 ATP-dependent DNA ligase. | 0.508 |
EDM35151.1 | EDM37781.1 | PBAL39_16756 | PBAL39_15189 | COG3685 Uncharacterized protein conserved in bacteria. | COG3685 Uncharacterized protein conserved in bacteria. | 0.761 |
EDM35152.1 | EDM35151.1 | PBAL39_16761 | PBAL39_16756 | Hypothetical protein. | COG3685 Uncharacterized protein conserved in bacteria. | 0.503 |
EDM35179.1 | EDM35151.1 | PBAL39_16896 | PBAL39_16756 | COG1793 ATP-dependent DNA ligase. | COG3685 Uncharacterized protein conserved in bacteria. | 0.508 |
EDM35179.1 | EDM37781.1 | PBAL39_16896 | PBAL39_15189 | COG1793 ATP-dependent DNA ligase. | COG3685 Uncharacterized protein conserved in bacteria. | 0.517 |
EDM37781.1 | EDM33853.1 | PBAL39_15189 | PBAL39_00005 | COG3685 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG5478 Predicted small integral membrane protein. | 0.491 |
EDM37781.1 | EDM35151.1 | PBAL39_15189 | PBAL39_16756 | COG3685 Uncharacterized protein conserved in bacteria. | COG3685 Uncharacterized protein conserved in bacteria. | 0.761 |
EDM37781.1 | EDM35179.1 | PBAL39_15189 | PBAL39_16896 | COG3685 Uncharacterized protein conserved in bacteria. | COG1793 ATP-dependent DNA ligase. | 0.517 |