STRINGSTRING
PBAL39_17644 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_17644" - Universal stress protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_17644Universal stress protein (286 aa)    
Predicted Functional Partners:
nrdF
Ribonucleoside-diphosphate reductase subunit beta ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (327 aa)
              0.526
PBAL39_10840
Putative outer membrane protein (946 aa)
   
          0.494
PBAL39_08901
Putative transmembrane rhomboid family protein (287 aa)
   
          0.463
nrdI
Ribonucleotide reductase stimulatory protein (122 aa)
              0.459
PBAL39_17654
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (696 aa)
              0.459
PBAL39_17664
Uncharacterized protein (79 aa)
              0.452
PBAL39_08916
Beta-N-acetylglucosaminidase (604 aa)
   
          0.413
PBAL39_10246
Uncharacterized protein (141 aa)
   
          0.411
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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