Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM36937.1 | EDM36938.1 | PBAL39_18724 | PBAL39_18729 | Hypothetical protein. | Hypothetical protein. | 0.603 |
EDM36937.1 | EDM36939.1 | PBAL39_18724 | PBAL39_18734 | Hypothetical protein. | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.451 |
EDM36937.1 | EDM36940.1 | PBAL39_18724 | PBAL39_18739 | Hypothetical protein. | Hypothetical protein. | 0.451 |
EDM36937.1 | EDM36941.1 | PBAL39_18724 | PBAL39_18744 | Hypothetical protein. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.438 |
EDM36938.1 | EDM36937.1 | PBAL39_18729 | PBAL39_18724 | Hypothetical protein. | Hypothetical protein. | 0.603 |
EDM36938.1 | EDM36939.1 | PBAL39_18729 | PBAL39_18734 | Hypothetical protein. | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.567 |
EDM36938.1 | EDM36940.1 | PBAL39_18729 | PBAL39_18739 | Hypothetical protein. | Hypothetical protein. | 0.567 |
EDM36938.1 | EDM36941.1 | PBAL39_18729 | PBAL39_18744 | Hypothetical protein. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.548 |
EDM36939.1 | EDM36937.1 | PBAL39_18734 | PBAL39_18724 | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.451 |
EDM36939.1 | EDM36938.1 | PBAL39_18734 | PBAL39_18729 | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.567 |
EDM36939.1 | EDM36940.1 | PBAL39_18734 | PBAL39_18739 | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.861 |
EDM36939.1 | EDM36941.1 | PBAL39_18734 | PBAL39_18744 | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.789 |
EDM36940.1 | EDM36937.1 | PBAL39_18739 | PBAL39_18724 | Hypothetical protein. | Hypothetical protein. | 0.451 |
EDM36940.1 | EDM36938.1 | PBAL39_18739 | PBAL39_18729 | Hypothetical protein. | Hypothetical protein. | 0.567 |
EDM36940.1 | EDM36939.1 | PBAL39_18739 | PBAL39_18734 | Hypothetical protein. | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.861 |
EDM36940.1 | EDM36941.1 | PBAL39_18739 | PBAL39_18744 | Hypothetical protein. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.776 |
EDM36940.1 | rpoA | PBAL39_18739 | PBAL39_08290 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.405 |
EDM36941.1 | EDM36937.1 | PBAL39_18744 | PBAL39_18724 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein. | 0.438 |
EDM36941.1 | EDM36938.1 | PBAL39_18744 | PBAL39_18729 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein. | 0.548 |
EDM36941.1 | EDM36939.1 | PBAL39_18744 | PBAL39_18734 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.789 |
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