STRINGSTRING
PBAL39_19519 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_19519" - Outer membrane efflux protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_19519Outer membrane efflux protein (445 aa)    
Predicted Functional Partners:
PBAL39_19514
Membrane-fusion protein (330 aa)
 
          0.920
PBAL39_19509
AcrB/AcrD/AcrF family protein (1021 aa)
 
          0.851
PBAL39_19524
Transcriptional regulator, TetR family protein (204 aa)
 
          0.727
PBAL39_24188
Putative outer membrane protein (994 aa)
   
          0.662
PBAL39_17964
Uncharacterized protein (260 aa)
   
          0.658
PBAL39_24183
Putative outer membrane protein (524 aa)
   
          0.637
PBAL39_24490
Putative outer membrane protein (1045 aa)
   
          0.615
PBAL39_13250
Uncharacterized protein (813 aa)
   
          0.609
PBAL39_15304
Uncharacterized protein (74 aa)
   
          0.606
PBAL39_18694
Putative outer membrane protein (505 aa)
   
          0.578
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (9%) [HD]