Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM33877.1 | EDM38478.1 | PBAL39_03212 | PBAL39_20435 | COG0246 Mannitol-1-phosphate/altronate dehydrogenases. | Hypothetical protein. | 0.541 |
EDM36457.1 | EDM38478.1 | PBAL39_12152 | PBAL39_20435 | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.450 |
EDM36457.1 | dapA | PBAL39_12152 | PBAL39_21950 | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.523 |
EDM38277.1 | EDM38478.1 | PBAL39_01642 | PBAL39_20435 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Hypothetical protein. | 0.421 |
EDM38477.1 | EDM38478.1 | PBAL39_20430 | PBAL39_20435 | Hypothetical protein; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Hypothetical protein. | 0.953 |
EDM38478.1 | EDM33877.1 | PBAL39_20435 | PBAL39_03212 | Hypothetical protein. | COG0246 Mannitol-1-phosphate/altronate dehydrogenases. | 0.541 |
EDM38478.1 | EDM36457.1 | PBAL39_20435 | PBAL39_12152 | Hypothetical protein. | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.450 |
EDM38478.1 | EDM38277.1 | PBAL39_20435 | PBAL39_01642 | Hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.421 |
EDM38478.1 | EDM38477.1 | PBAL39_20435 | PBAL39_20430 | Hypothetical protein. | Hypothetical protein; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.953 |
EDM38478.1 | dapA | PBAL39_20435 | PBAL39_21950 | Hypothetical protein. | Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.475 |
dapA | EDM36457.1 | PBAL39_21950 | PBAL39_12152 | Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.523 |
dapA | EDM38478.1 | PBAL39_21950 | PBAL39_20435 | Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Hypothetical protein. | 0.475 |