Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM33901.1 | EDM36329.1 | PBAL39_17599 | PBAL39_11512 | Hypothetical protein. | Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family. | 0.858 |
EDM33901.1 | EDM36667.1 | PBAL39_17599 | PBAL39_25405 | Hypothetical protein. | COG1045 Serine acetyltransferase. | 0.421 |
EDM33901.1 | EDM36861.1 | PBAL39_17599 | PBAL39_18344 | Hypothetical protein. | COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.466 |
EDM33901.1 | EDM38523.1 | PBAL39_17599 | PBAL39_20660 | Hypothetical protein. | CDP-diacylglycerol-serine-O- phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.857 |
EDM33901.1 | cls | PBAL39_17599 | PBAL39_25625 | Hypothetical protein. | Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.604 |
EDM33901.1 | guaB | PBAL39_17599 | PBAL39_25035 | Hypothetical protein. | IMP dehydrogenase/GMP reductase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.455 |
EDM33901.1 | psd | PBAL39_17599 | PBAL39_11387 | Hypothetical protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.815 |
EDM36329.1 | EDM33901.1 | PBAL39_11512 | PBAL39_17599 | Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family. | Hypothetical protein. | 0.858 |
EDM36329.1 | EDM36861.1 | PBAL39_11512 | PBAL39_18344 | Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family. | COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.878 |
EDM36329.1 | EDM38523.1 | PBAL39_11512 | PBAL39_20660 | Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family. | CDP-diacylglycerol-serine-O- phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.948 |
EDM36329.1 | cls | PBAL39_11512 | PBAL39_25625 | Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family. | Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.684 |
EDM36667.1 | EDM33901.1 | PBAL39_25405 | PBAL39_17599 | COG1045 Serine acetyltransferase. | Hypothetical protein. | 0.421 |
EDM36667.1 | EDM38523.1 | PBAL39_25405 | PBAL39_20660 | COG1045 Serine acetyltransferase. | CDP-diacylglycerol-serine-O- phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.862 |
EDM36667.1 | guaB | PBAL39_25405 | PBAL39_25035 | COG1045 Serine acetyltransferase. | IMP dehydrogenase/GMP reductase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.472 |
EDM36667.1 | ilvA | PBAL39_25405 | PBAL39_23302 | COG1045 Serine acetyltransferase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.869 |
EDM36861.1 | EDM33901.1 | PBAL39_18344 | PBAL39_17599 | COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Hypothetical protein. | 0.466 |
EDM36861.1 | EDM36329.1 | PBAL39_18344 | PBAL39_11512 | COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family. | 0.878 |
EDM36861.1 | EDM38523.1 | PBAL39_18344 | PBAL39_20660 | COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | CDP-diacylglycerol-serine-O- phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.475 |
EDM36861.1 | cls | PBAL39_18344 | PBAL39_25625 | COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.465 |
EDM38521.1 | EDM38523.1 | PBAL39_20650 | PBAL39_20660 | COG0284 Orotidine-5'-phosphate decarboxylase. | CDP-diacylglycerol-serine-O- phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.535 |
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