STRINGSTRING
PBAL39_20870 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20870" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20870Uncharacterized protein (483 aa)    
Predicted Functional Partners:
PBAL39_20875
Uncharacterized protein (310 aa)
        0.978
PBAL39_20880
Transglutaminase-like protein (345 aa)
 
        0.961
PBAL39_20860
Transglutaminase-like enzyme, putative cysteine protease (280 aa)
 
        0.929
PBAL39_20865
Proteasome-type protease (247 aa)
 
        0.918
PBAL39_05603
Gamma-glutamylcysteine synthetase 2 ; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity (367 aa)
 
 
        0.486
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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