STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38617.1COG3279 Response regulator of the LytR/AlgR family. (253 aa)    
Predicted Functional Partners:
EDM38618.1
Putative two-component system sensor protein histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  0.960
EDM35955.1
Putative two-component system sensor histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
  0.874
EDM34963.1
Two-component signal transduction histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
  0.849
EDM36742.1
Putative two-component system sensor protein histidine kinase; COG3275 Putative regulator of cell autolysis.
 
  0.843
EDM36580.1
Diguanylate cyclase/phosphodiesterase; COG3292 Predicted periplasmic ligand-binding sensor domain.
  
  0.843
EDM36284.1
Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  0.840
EDM35945.1
Putative two-component system sensor protein histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  0.840
EDM36891.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
  0.832
EDM38375.1
Putative two-component system sensor histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
  0.824
EDM38453.1
Putative two-component system sensor but no kinase domain; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
  0.824
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.