STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38667.1Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (192 aa)    
Predicted Functional Partners:
EDM38668.1
Hypothetical protein.
       0.861
EDM38669.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.861
EDM38670.1
Hypothetical protein.
       0.828
EDM38666.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.733
EDM38671.1
COG2989 Uncharacterized protein conserved in bacteria.
       0.692
EDM38664.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.641
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.614
EDM38665.1
B-glycosyltransferase, glycosyltransferase family 2 protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
       0.612
EDM38663.1
Auxin-regulated protein; COG1021 Peptide arylation enzymes.
       0.603
EDM34515.1
Hypothetical protein.
  
     0.567
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.