STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36012.1ABC transporter related protein; COG1131 ABC-type multidrug transport system, ATPase component. (309 aa)    
Predicted Functional Partners:
EDM36011.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  0.968
EDM34890.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.917
EDM35531.1
ABC transporter, permease protein, putative; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.917
EDM34887.1
ABC transporter, permease protein, putative; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.916
EDM38905.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.916
EDM37520.1
ABC transporter, permease protein, putative; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  0.907
EDM36923.1
ABC transporter, permease protein, putative; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  0.907
EDM38725.1
ABC transporter permease; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.904
EDM36010.1
Putative mismatch repair-like protein; COG0249 Mismatch repair ATPase (MutS family).
 
     0.711
EDM36009.1
Putative mismatch repair-like protein; COG0249 Mismatch repair ATPase (MutS family).
 
     0.687
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.