STRINGSTRING
PBAL39_23472 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23472" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23472Uncharacterized protein (276 aa)    
Predicted Functional Partners:
PBAL39_23477
Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)
              0.775
PBAL39_23467
Uncharacterized protein (311 aa)
              0.709
PBAL39_23462
Uncharacterized protein (206 aa)
              0.646
PBAL39_23487
ABC transporter, ATP-binding protein (250 aa)
              0.536
PBAL39_23482
ABC transporter, permease (244 aa)
              0.536
PBAL39_08961
Uncharacterized protein (125 aa)
 
          0.526
PBAL39_23492
Possible oxidoreductase (294 aa)
              0.520
PBAL39_25555
Response regulator (139 aa)
       
      0.457
PBAL39_11842
Response regulator receiver domain protein (CheY-like) (120 aa)
       
      0.457
PBAL39_06726
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (258 aa)
       
      0.457
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (11%) [HD]