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truB protein (Pedobacter sp. BAL39) - STRING interaction network
"truB" - tRNA-uridine isomerase in Pedobacter sp. BAL39
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
truBtRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (258 aa)    
Predicted Functional Partners:
PBAL39_24008
Riboflavin biosynthesis protein (311 aa)
 
   
  0.972
rpsA
30S ribosomal protein S1 (644 aa)
   
 
  0.913
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (509 aa)
     
   
  0.895
PBAL39_08140
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (283 aa)
   
  0.853
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (1013 aa)
 
 
  0.850
PBAL39_24003
Uncharacterized protein (287 aa)
              0.846
PBAL39_03904
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (267 aa)
   
  0.836
PBAL39_23993
Undecaprenol kinase (Bacitracin resistance protein) (238 aa)
              0.817
rplC
50S ribosomal protein L3 ; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (205 aa)
   
 
  0.805
PBAL39_08821
Pseudouridine synthase (463 aa)
 
   
  0.798
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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