Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM34183.1 | EDM34648.1 | PBAL39_03404 | PBAL39_24243 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | Hypothetical protein. | 0.984 |
EDM34183.1 | EDM34956.1 | PBAL39_03404 | PBAL39_00450 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34183.1 | EDM35866.1 | PBAL39_03404 | PBAL39_06791 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34183.1 | EDM36391.1 | PBAL39_03404 | PBAL39_11822 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34183.1 | EDM36646.1 | PBAL39_03404 | PBAL39_25300 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | Multisensor diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain. | 0.999 |
EDM34183.1 | EDM37112.1 | PBAL39_03404 | PBAL39_04918 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | Multi-sensor hybrid histidine kinase; COG2203 FOG: GAF domain. | 0.999 |
EDM34183.1 | EDM37157.1 | PBAL39_03404 | PBAL39_05143 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34183.1 | EDM37197.1 | PBAL39_03404 | PBAL39_05343 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34183.1 | EDM37808.1 | PBAL39_03404 | PBAL39_15324 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | MCP methyltransferase, CheR-type; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.999 |
EDM34183.1 | EDM38009.1 | PBAL39_03404 | PBAL39_16329 | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34648.1 | EDM34183.1 | PBAL39_24243 | PBAL39_03404 | Hypothetical protein. | Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain. | 0.984 |
EDM34648.1 | EDM34956.1 | PBAL39_24243 | PBAL39_00450 | Hypothetical protein. | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | 0.970 |
EDM34648.1 | EDM35866.1 | PBAL39_24243 | PBAL39_06791 | Hypothetical protein. | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34648.1 | EDM36391.1 | PBAL39_24243 | PBAL39_11822 | Hypothetical protein. | Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34648.1 | EDM36646.1 | PBAL39_24243 | PBAL39_25300 | Hypothetical protein. | Multisensor diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain. | 0.970 |
EDM34648.1 | EDM37112.1 | PBAL39_24243 | PBAL39_04918 | Hypothetical protein. | Multi-sensor hybrid histidine kinase; COG2203 FOG: GAF domain. | 0.999 |
EDM34648.1 | EDM37157.1 | PBAL39_24243 | PBAL39_05143 | Hypothetical protein. | COG0642 Signal transduction histidine kinase. | 0.999 |
EDM34648.1 | EDM37197.1 | PBAL39_24243 | PBAL39_05343 | Hypothetical protein. | COG0642 Signal transduction histidine kinase. | 0.970 |
EDM34648.1 | EDM37808.1 | PBAL39_24243 | PBAL39_15324 | Hypothetical protein. | MCP methyltransferase, CheR-type; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.959 |
EDM34648.1 | EDM38009.1 | PBAL39_24243 | PBAL39_16329 | Hypothetical protein. | COG0642 Signal transduction histidine kinase. | 0.970 |
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