STRINGSTRING
PBAL39_24330 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24330" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24330Uncharacterized protein (326 aa)    
Predicted Functional Partners:
PBAL39_24325
Uncharacterized protein (293 aa)
 
          0.878
PBAL39_16741
Uncharacterized protein (437 aa)
   
          0.588
PBAL39_24985
Uncharacterized protein (280 aa)
   
          0.548
PBAL39_04338
CHU large protein uncharacterized (3896 aa)
   
          0.545
PBAL39_04204
Probable transcriptional regulator, MerR family protein (263 aa)
   
          0.513
PBAL39_22750
Outer membrane efflux protein (483 aa)
 
          0.494
PBAL39_25530
General stress protein (162 aa)
   
          0.483
PBAL39_24980
Uncharacterized protein (233 aa)
   
          0.479
PBAL39_06821
Uncharacterized protein (148 aa)
   
          0.468
PBAL39_09721
Uncharacterized protein (376 aa)
   
          0.463
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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