STRINGSTRING
PBAL39_24985 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24985" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24985Uncharacterized protein (280 aa)    
Predicted Functional Partners:
PBAL39_24980
Uncharacterized protein (233 aa)
 
       
0.884
PBAL39_08796
Uncharacterized protein (292 aa)
   
          0.734
PBAL39_20965
Uncharacterized protein (485 aa)
   
          0.694
PBAL39_22175
Uncharacterized protein (268 aa)
   
          0.673
PBAL39_24560
Uncharacterized protein (502 aa)
   
          0.657
PBAL39_20960
Putative outer membrane protein (1104 aa)
   
          0.648
PBAL39_18644
Uncharacterized protein (487 aa)
   
          0.627
PBAL39_09391
Uncharacterized protein (270 aa)
   
          0.601
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.599
PBAL39_18039
Uncharacterized protein (600 aa)
   
          0.591
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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