STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36647.1COG2217 Cation transport ATPase. (737 aa)    
Predicted Functional Partners:
EDM36648.1
Hypothetical protein; COG2608 Copper chaperone.
 
  0.956
EDM36650.1
COG2217 Cation transport ATPase.
  
  0.786
EDM34551.1
Hypothetical protein; COG0165 Argininosuccinate lyase.
 
  0.761
EDM34547.1
COG2217 Cation transport ATPase.
 
 
0.736
EDM34548.1
Copper-resistance protein CopA; COG2132 Putative multicopper oxidases.
 
 
 0.527
EDM36649.1
Hypothetical protein.
       0.449
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.