STRINGSTRING
PBAL39_25365 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25365" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25365Uncharacterized protein (862 aa)    
Predicted Functional Partners:
PBAL39_25370
Probable acvb-related protein (464 aa)
 
   
  0.936
PBAL39_20830
CDP-alcohol phosphatidyltransferase (241 aa)
   
          0.731
PBAL39_20835
Uncharacterized protein (143 aa)
   
          0.661
PBAL39_16741
Uncharacterized protein (437 aa)
   
          0.657
PBAL39_01262
Uncharacterized protein (578 aa)
   
          0.587
PBAL39_25360
Universal stress protein (303 aa)
              0.568
PBAL39_24900
Lysyl-tRNA synthetase (592 aa)
 
     
    0.509
PBAL39_07800
Acetyl esterase (Acetylxylosidase) (281 aa)
 
          0.464
PBAL39_24490
Putative outer membrane protein (1045 aa)
   
          0.443
PBAL39_02935
Probable periplasmic binding protein possible mechanosensitive ion channel component (767 aa)
   
          0.437
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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