STRINGSTRING
PBAL39_25415 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25415" - Outer membrane assembly protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25415Outer membrane assembly protein (422 aa)    
Predicted Functional Partners:
PBAL39_25425
Membrane spanning protein, required for outer membrane integrity (526 aa)
 
          0.974
PBAL39_24360
Uncharacterized protein (474 aa)
   
          0.772
PBAL39_24355
Uncharacterized protein (1204 aa)
   
          0.753
PBAL39_25420
Uncharacterized protein (60 aa)
              0.665
PBAL39_00015
Uncharacterized protein (267 aa)
   
          0.648
PBAL39_03769
Uncharacterized protein (964 aa)
   
          0.646
PBAL39_13305
Uncharacterized protein (969 aa)
   
          0.633
PBAL39_17514
Uncharacterized protein (811 aa)
   
          0.624
PBAL39_03629
Uncharacterized protein (176 aa)
   
          0.616
PBAL39_10176
Uncharacterized protein (430 aa)
   
          0.606
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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