STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM84272.1Putative cytochrome C precursor-related protein; COG2863 Cytochrome c553. (110 aa)    
Predicted Functional Partners:
EDM83224.1
COG3453 Uncharacterized protein conserved in bacteria.
   
 0.952
EDM82009.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
 0.943
EDM85142.1
COG2857 Cytochrome c1.
 
 
 0.854
EDM84954.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.844
EDM85140.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.827
EDM82900.1
Probable cytochrome-c oxidase protein; COG2863 Cytochrome c553.
 
 
0.803
EDM84273.1
Putative periplasmic cytochrome type-c oxidoreductase signal peptide protein; COG2863 Cytochrome c553.
 
   
0.797
EDM85141.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.795
EDM83697.1
Cytochrome c, class I; COG3258 Cytochrome c.
  
 
 0.766
EDM84746.1
Cytochrome c, class I; COG3245 Cytochrome c5.
 
  
 0.754
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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