STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnPCarbon-phosphorus lyase complex accessory protein; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I. (255 aa)    
Predicted Functional Partners:
EDM84609.1
Phosphonate metabolism protein PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 
 0.981
EDM84610.1
COG3626 Uncharacterized enzyme of phosphonate metabolism.
 
 
 0.954
phnN
Guanylate kinase/L-type calcium channel region; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
 
 0.948
EDM84606.1
Amidohydrolase-like protein; COG3454 Metal-dependent hydrolase involved in phosphonate metabolism.
 
  
 0.939
EDM84607.1
ABC transporter related protein; COG4778 ABC-type phosphonate transport system, ATPase component.
 
  
 0.937
EDM84603.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.917
phnH
Carbon-phosphorus lyase complex subunit; COG3625 Uncharacterized enzyme of phosphonate metabolism.
 
  
 0.900
EDM84608.1
COG4107 ABC-type phosphonate transport system, ATPase component.
 
  
 0.896
EDM84616.1
Transcriptional Regulator, GntR family protein; COG2188 Transcriptional regulators.
 
  
 0.801
EDM84612.1
Hypothetical protein; COG3624 Uncharacterized enzyme of phosphonate metabolism.
  
  
 0.798
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.