STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM84754.1Cyclic nucleotide-binding protein; COG0659 Sulfate permease and related transporters (MFS superfamily). (732 aa)    
Predicted Functional Partners:
EDM84058.1
Ankyrin; COG0666 FOG: Ankyrin repeat.
    
 0.970
EDM82997.1
Adenylate/guanylate cyclase; COG4252 Predicted transmembrane sensor domain.
 
 
 0.942
EDM84758.1
PAS/PAC domain protein; COG0642 Signal transduction histidine kinase.
 
 
 0.930
EDM84593.1
COG0642 Signal transduction histidine kinase.
 
 
 0.912
EDM84467.1
Probable transmembrane abc transporter protein; COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 0.908
EDM82034.1
Hypothetical protein; COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
   
 0.903
EDM85141.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.902
EDM82689.1
PAS; COG0642 Signal transduction histidine kinase.
 
 
 0.895
EDM82371.1
Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily.
 
 
 0.888
EDM83079.1
Hpt sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
 
 0.877
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.