STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM84890.1COG3517 Uncharacterized protein conserved in bacteria. (496 aa)    
Predicted Functional Partners:
EDM84889.1
COG3516 Uncharacterized protein conserved in bacteria.
 0.999
EDM84496.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.998
EDM84891.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
 
 0.996
EDM84892.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
 
 0.993
EDM84896.1
Probable ClpA/B-type chaperone; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
 0.991
EDM83328.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
 
 0.991
EDM84888.1
COG3515 Uncharacterized protein conserved in bacteria.
 
 
 0.982
EDM84895.1
COG3520 Uncharacterized protein conserved in bacteria.
 
 
 0.980
EDM84894.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.977
EDM84497.1
COG3523 Uncharacterized protein conserved in bacteria.
 
 
 0.970
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.