STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM85120.1COG3113 Predicted NTP binding protein (contains STAS domain). (83 aa)    
Predicted Functional Partners:
EDM85119.1
Toluene tolerance; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
 0.977
EDM85115.1
ABC transporter related protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
 0.920
EDM85117.1
Mammalian cell entry related protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.917
EDM85116.1
COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
 0.900
EDM84435.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
    
  0.679
EDM85118.1
COG2853 Surface lipoprotein.
     
 0.679
EDM85121.1
Probable atp-binding abc transporter protein; COG1131 ABC-type multidrug transport system, ATPase component.
       0.673
EDM85122.1
COG0842 ABC-type multidrug transport system, permease component.
       0.673
EDM85123.1
COG5007 Predicted transcriptional regulator, BolA superfamily; Belongs to the BolA/IbaG family.
       0.621
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.593
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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