STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM82565.1Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. (757 aa)    
Predicted Functional Partners:
EDM84742.1
Chemotaxis two-component response regulator protein; COG0784 FOG: CheY-like receiver.
 
0.999
EDM83079.1
Hpt sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
0.998
EDM84331.1
Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
 0.998
EDM84593.1
COG0642 Signal transduction histidine kinase.
 
0.998
EDM84677.1
Hypothetical tryptophan-rich sensor protein; COG3614 Predicted periplasmic ligand-binding sensor domain.
 
0.998
EDM84712.1
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine; COG0642 Signal transduction histidine kinase.
 
0.998
EDM84758.1
PAS/PAC domain protein; COG0642 Signal transduction histidine kinase.
 
0.998
EDM84770.1
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine; COG0642 Signal transduction histidine kinase.
 
0.998
EDM83400.1
COG0642 Signal transduction histidine kinase.
 
 0.998
EDM82882.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
0.998
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.