STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM82575.1Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (313 aa)    
Predicted Functional Partners:
EDM82573.1
COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
       0.774
EDM82574.1
Alcohol dehydrogenase, zinc-binding domain protein; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
       0.774
EDM82576.1
6-phosphogluconate dehydrogenase, NAD-binding protein; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
       0.741
EDM82577.1
COG1671 Uncharacterized protein conserved in bacteria; Belongs to the UPF0178 family.
       0.512
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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