STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM83485.1Hypothetical protein. (271 aa)    
Predicted Functional Partners:
EDM83484.1
Cytidyltransferase-related protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
       0.785
EDM82381.1
Flagellar export FliJ; COG2882 Flagellar biosynthesis chaperone.
  
     0.566
ubiB
Putative ubiquinone biosynthesis; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
      0.529
EDM83747.1
COG1333 ResB protein required for cytochrome c biosynthesis.
  
     0.519
EDM84260.1
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
    
 
 0.517
EDM85155.1
Oxidoreductase; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
    
 
 0.517
EDM83469.1
Putative lipoprotein; COG5010 Flp pilus assembly protein TadD, contains TPR repeats.
  
     0.513
EDM83057.1
Hypothetical protein.
  
     0.489
EDM83054.1
Probable transmembrane protein.
  
     0.478
EDM83510.1
FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases.
 
   
 0.469
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.