STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM83490.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
EDM83488.1
Lipoprotein, putative.
 
     0.943
EDM83486.1
Hypothetical protein.
 
     0.931
EDM83493.1
Amine oxidase:FAD dependent oxidoreductase; COG2907 Predicted NAD/FAD-binding protein.
 
     0.918
EDM83492.1
Hypothetical protein.
 
     0.912
EDM83489.1
Major facilitator superfamily MFS_1; COG2211 Na+/melibiose symporter and related transporters.
 
     0.887
EDM83487.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.885
EDM83491.1
COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
 
     0.856
gshB
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.
    
 0.734
EDM83496.1
Regulatory protein, MerR; COG0789 Predicted transcriptional regulators.
 
     0.576
folE2
Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
       0.528
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.