STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM83180.1Probable activation/secretion signal peptide protein; COG2831 Hemolysin activation/secretion protein. (546 aa)    
Predicted Functional Partners:
EDM83178.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
 
 0.950
EDM82995.1
Filamentous haemagglutinin-like protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
 
 0.854
EDM84486.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
 
 0.851
EDM83179.1
Hypothetical protein.
       0.718
EDM83181.1
Hypothetical protein.
       0.705
EDM83193.1
COG0642 Signal transduction histidine kinase.
  
     0.556
EDM83123.1
Hypothetical protein; COG0627 Predicted esterase.
  
     0.524
EDM83182.1
Hypothetical protein.
       0.464
EDM82517.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
     0.449
EDM83666.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
  
     0.414
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.