STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM82389.1COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB. (95 aa)    
Predicted Functional Partners:
EDM82390.1
Hypothetical protein.
 
  
 0.882
EDM82388.1
Hypothetical protein; COG5581 Predicted glycosyltransferase.
  
    0.838
EDM82373.1
Bacterial export protein, family 1; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
 
    0.738
EDM82392.1
Flagellar protein FliS; COG1516 Flagellin-specific chaperone FliS.
  
  
 0.722
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
    0.700
EDM82377.1
COG1886 Flagellar motor switch/type III secretory pathway protein.
 
  
 0.693
EDM82391.1
Flagellar protein FliT; COG0840 Methyl-accepting chemotaxis protein.
       0.675
EDM82384.1
COG1536 Flagellar motor switch protein.
 
    0.658
EDM82649.1
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
     0.654
EDM82653.1
COG4786 Flagellar basal body rod protein.
 
 
 
 0.635
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.