Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM82115.1 | EDM82917.1 | LMED105_10820 | LMED105_10575 | COG1910 Periplasmic molybdate-binding protein/domain. | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | 0.778 |
| EDM82115.1 | EDM83611.1 | LMED105_10820 | LMED105_12607 | COG1910 Periplasmic molybdate-binding protein/domain. | COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein. | 0.444 |
| EDM82115.1 | EDM84003.1 | LMED105_10820 | LMED105_13543 | COG1910 Periplasmic molybdate-binding protein/domain. | Molybdopterin binding domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.853 |
| EDM82115.1 | fdhD | LMED105_10820 | LMED105_13553 | COG1910 Periplasmic molybdate-binding protein/domain. | Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.737 |
| EDM82115.1 | mobA | LMED105_10820 | LMED105_13548 | COG1910 Periplasmic molybdate-binding protein/domain. | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.474 |
| EDM82115.1 | mogA | LMED105_10820 | LMED105_00495 | COG1910 Periplasmic molybdate-binding protein/domain. | Molybdenum cofactor biosynthesis protein; COG0521 Molybdopterin biosynthesis enzymes. | 0.447 |
| EDM82879.1 | EDM82917.1 | LMED105_10385 | LMED105_10575 | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | 0.519 |
| EDM82879.1 | EDM83614.1 | LMED105_10385 | LMED105_12622 | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Probable molybdopterin mpt converting factor (subunit 2) protein; COG0314 Molybdopterin converting factor, large subunit. | 0.458 |
| EDM82879.1 | EDM84003.1 | LMED105_10385 | LMED105_13543 | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Molybdopterin binding domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.828 |
| EDM82879.1 | moaA | LMED105_10385 | LMED105_13558 | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.611 |
| EDM82879.1 | moaC | LMED105_10385 | LMED105_15683 | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.754 |
| EDM82879.1 | mogA | LMED105_10385 | LMED105_00495 | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Molybdenum cofactor biosynthesis protein; COG0521 Molybdopterin biosynthesis enzymes. | 0.422 |
| EDM82917.1 | EDM82115.1 | LMED105_10575 | LMED105_10820 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | COG1910 Periplasmic molybdate-binding protein/domain. | 0.778 |
| EDM82917.1 | EDM82879.1 | LMED105_10575 | LMED105_10385 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.519 |
| EDM82917.1 | EDM83611.1 | LMED105_10575 | LMED105_12607 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein. | 0.593 |
| EDM82917.1 | EDM84003.1 | LMED105_10575 | LMED105_13543 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | Molybdopterin binding domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.864 |
| EDM82917.1 | fdhD | LMED105_10575 | LMED105_13553 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.689 |
| EDM82917.1 | moaA | LMED105_10575 | LMED105_13558 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.737 |
| EDM82917.1 | moaC | LMED105_10575 | LMED105_15683 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.534 |
| EDM82917.1 | mobA | LMED105_10575 | LMED105_13548 | Transcriptional regulator of molybdate metabolism, LysR family protein; COG2005 N-terminal domain of molybdenum-binding protein. | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.703 |
page 1 of 5