STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM82517.1Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases. (351 aa)    
Predicted Functional Partners:
EDM82518.1
COG1309 Transcriptional regulator.
 
     0.759
EDM83123.1
Hypothetical protein; COG0627 Predicted esterase.
  
     0.736
EDM82503.1
MaoC domain protein; COG0583 Transcriptional regulator.
  
    0.700
EDM83249.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
     
 0.661
EDM83224.1
COG3453 Uncharacterized protein conserved in bacteria.
    
  0.660
EDM83193.1
COG0642 Signal transduction histidine kinase.
  
     0.639
EDM83152.1
Hypothetical protein.
  
     0.623
EDM84756.1
Peptidase S45, penicillin amidase; COG2366 Protein related to penicillin acylase.
  
     0.622
EDM82009.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
    
  0.618
EDM83666.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
  
     0.615
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.