STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM82471.1Heavy metal transport/detoxification protein; COG2608 Copper chaperone. (66 aa)    
Predicted Functional Partners:
EDM82470.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
 
 0.987
EDM84080.1
Haloacid dehalogenase/epoxide hydrolase family protein; COG2217 Cation transport ATPase.
 
 
 0.982
EDM82469.1
Putative transcriptional regulator, MerR family protein; COG0789 Predicted transcriptional regulators.
 
  
 0.763
EDM82412.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.744
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.718
EDM82483.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.507
EDM84465.1
Transcriptional Regulator, ArsR family protein; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.500
EDM84886.1
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzyme; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
  
 0.494
EDM83408.1
Hypothetical protein.
  
  
 0.494
EDM84113.1
Mercuric transport protein MerT.
  
  
 0.494
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.