STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM82139.1Hypothetical protein. (447 aa)    
Predicted Functional Partners:
EDM82140.1
Hypothetical protein.
 
    0.949
EDM82138.1
COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
    0.905
EDM82137.1
COG1033 Predicted exporters of the RND superfamily.
 
   
 0.885
EDM85191.1
Hypothetical protein.
 
    0.876
EDM85193.1
COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
    0.810
EDM85194.1
Hypothetical protein; COG1033 Predicted exporters of the RND superfamily.
 
   
 0.779
EDM83245.1
Hypothetical protein; COG1033 Predicted exporters of the RND superfamily.
 
   
 0.768
EDM83244.1
Glycosyl hydrolase, BNR repeat; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
 
    0.677
EDM82744.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
    
   0.606
EDM83640.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
   
 
 0.602
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.