STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolQMotA/TolQ/ExbB proton channel; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (219 aa)    
Predicted Functional Partners:
EDM82786.1
COG0848 Biopolymer transport protein.
 
 
 0.988
EDM82886.1
Biopolymer transport protein, ExbD/TolR family; COG0848 Biopolymer transport protein.
 
 
 0.962
tolB
Translocation protein TolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.939
pal
Outer membrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
   
 0.900
EDM82415.1
COG0848 Biopolymer transport protein.
 
 
 0.884
EDM82888.1
TonB, C-terminal; COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.837
EDM83366.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
 
 0.783
EDM81966.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.721
EDM82784.1
COG0824 Predicted thioesterase.
 
  
 0.706
cpoB
Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.702
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.