STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl3250S ribosomal protein L32, chloroplastic. (53 aa)    
Predicted Functional Partners:
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
 
 0.943
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
    
 
 0.919
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.911
rps11
30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.910
LOC106772763
50S ribosomal protein L22, chloroplastic; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.909
LOC106776069
50S ribosomal protein L22, chloroplastic-like; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.909
rpl36
50S ribosomal protein L36, chloroplastic.
   
 
 0.907
rps15
30S ribosomal protein S15, chloroplastic; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.905
rps2
30S ribosomal protein S2, chloroplastic.
   
 
 0.902
rps18
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.900
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.