STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106752736Calcium-binding protein CML38. (140 aa)    
Predicted Functional Partners:
LOC106779222
NO-associated protein 1, chloroplastic/mitochondrial.
     
  0.650
LOC106768501
Kinesin-like protein KIN-14E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.603
LOC106777740
Kinesin-like protein KIN-14I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.603
LOC106775858
Peptidylprolyl isomerase.
   
 0.551
LOC106762997
DNA repair protein RAD4 isoform X1.
    
 0.520
LOC106769418
Two pore calcium channel protein 1.
    
 
 0.494
LOC106767904
Probable calcium-binding protein CML13 isoform X1.
  
   
 0.472
LOC106774664
Uncharacterized protein LOC106774664 isoform X1.
   
 0.470
LOC106775365
Uncharacterized protein LOC106775365.
   
 0.470
LOC106754577
Ankyrin-3.
    
 0.428
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.