STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106752734Probable WRKY transcription factor 51. (196 aa)    
Predicted Functional Partners:
LOC106775263
GDP-mannose transporter GONST2 isoform X1.
      
 0.704
LOC106753470
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.694
LOC106780009
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.694
LOC106754088
DELLA protein RGL1-like; Belongs to the GRAS family.
      
 0.689
LOC106758589
Zinc finger A20 and AN1 domain-containing stress-associated protein 3.
      
 0.689
LOC111241660
Zinc finger A20 and AN1 domain-containing stress-associated protein 6-like.
      
 0.689
LOC106780725
GDP-mannose transporter GONST1.
      
 0.580
LOC106774177
Cyclic nucleotide-gated ion channel 1.
      
 0.574
LOC106778896
Cyclic nucleotide-gated ion channel 1 isoform X1.
      
 0.574
LOC106773125
Cyclic nucleotide-gated ion channel 1-like.
      
 0.574
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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