STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106752992E3 ubiquitin-protein ligase At1g63170. (363 aa)    
Predicted Functional Partners:
LOC106773908
Uncharacterized protein LOC106773908.
  
     0.461
LOC106763768
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
   0.423
LOC106778579
Homeobox-leucine zipper protein ROC2-like isoform X1.
  
     0.420
LOC106760466
Uncharacterized protein LOC106760466.
  
 
   0.413
LOC106755774
Uncharacterized protein LOC106755774.
  
     0.406
LOC111241154
Uncharacterized protein LOC111241154; Belongs to the peroxidase family.
  
     0.400
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.